STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000017092Histone deacetylase 11. (367 aa)    
Predicted Functional Partners:
ENSNMLP00000010562
annotation not available
    
 0.976
ENSNMLP00000013779
Translocase of outer mitochondrial membrane 20.
    
 0.976
ENSNMLP00000031101
annotation not available
    
 0.968
ENSNMLP00000036843
annotation not available
    
 0.968
ENSNMLP00000015658
annotation not available
   
 0.917
ENSNMLP00000009968
macroH2A.2 histone.
    
 0.914
ENSNMLP00000012776
macroH2A.1 histone.
    
 0.914
ENSNMLP00000022543
annotation not available
    
 0.914
ENSNMLP00000016621
annotation not available
   
 0.890
ENSNMLP00000038786
H2A.Z variant histone 2a.
   
 0.890
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.