STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000017128Si:ch211-221f10.2. (1311 aa)    
Predicted Functional Partners:
ENSNMLP00000006047
Katanin p60 subunit A-like 2.
  
 0.720
ENSNMLP00000005338
Golgi-associated PDZ and coiled-coil motif containing.
   
 0.703
ENSNMLP00000012380
annotation not available
  
  0.697
ENSNMLP00000012382
annotation not available
  
  0.697
USP10
Ubiquitin specific peptidase 10.
    
  0.686
ENSNMLP00000007213
Derlin 1.
    
 0.664
ENSNMLP00000037622
Nicolin 1.
     
 0.650
ENSNMLP00000017669
FCF1 rRNA-processing protein.
     
 0.646
ENSNMLP00000030272
Potassium inwardly rectifying channel subfamily J member 8.
   
 0.636
ENSNMLP00000011020
Potassium inwardly rectifying channel subfamily J member 5.
   
 0.635
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.