ENSNMLP00000017163 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000017163

Armadillo like helical domain containing 3. (641 aa)

Predicted Functional Partners:

ENSNMLP00000038474

0.650

ENSNMLP00000020390

0.483

ENSNMLP00000022888

0.483

ENSNMLP00000026670

0.483

ENSNMLP00000008691

0.482

ENSNMLP00000016609

0.482

ENSNMLP00000005431

0.466

ENSNMLP00000013964

0.466

ENSNMLP00000013972

0.464

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000005431	ENSNMLP00000017163	Ubiquitin associated and SH3 domain containing Ba.	Armadillo like helical domain containing 3.	0.466
ENSNMLP00000008691	ENSNMLP00000017163	CCR4-NOT transcription complex, subunit 10.	Armadillo like helical domain containing 3.	0.482
ENSNMLP00000013964	ENSNMLP00000017163	Ubiquitin associated and SH3 domain containing Bb.	Armadillo like helical domain containing 3.	0.466
ENSNMLP00000013972	ENSNMLP00000017163	Glucuronokinase with putative uridyl pyrophosphorylase.	Armadillo like helical domain containing 3.	0.464
ENSNMLP00000016609	ENSNMLP00000017163	WAS/WASL interacting protein family member 3.	Armadillo like helical domain containing 3.	0.482
ENSNMLP00000016609	ENSNMLP00000020390	WAS/WASL interacting protein family member 3.	Biogenesis of lysosomal organelles complex-1, subunit 2.	0.485
ENSNMLP00000017163	ENSNMLP00000005431	Armadillo like helical domain containing 3.	Ubiquitin associated and SH3 domain containing Ba.	0.466
ENSNMLP00000017163	ENSNMLP00000008691	Armadillo like helical domain containing 3.	CCR4-NOT transcription complex, subunit 10.	0.482
ENSNMLP00000017163	ENSNMLP00000013964	Armadillo like helical domain containing 3.	Ubiquitin associated and SH3 domain containing Bb.	0.466
ENSNMLP00000017163	ENSNMLP00000013972	Armadillo like helical domain containing 3.	Glucuronokinase with putative uridyl pyrophosphorylase.	0.464
ENSNMLP00000017163	ENSNMLP00000016609	Armadillo like helical domain containing 3.	WAS/WASL interacting protein family member 3.	0.482
ENSNMLP00000017163	ENSNMLP00000020390	Armadillo like helical domain containing 3.	Biogenesis of lysosomal organelles complex-1, subunit 2.	0.483
ENSNMLP00000017163	ENSNMLP00000022888	Armadillo like helical domain containing 3.	ATPase H+ transporting V1 subunit C1b.	0.483
ENSNMLP00000017163	ENSNMLP00000026670	Armadillo like helical domain containing 3.	ATPase H+ transporting V1 subunit C1a.	0.483
ENSNMLP00000017163	ENSNMLP00000038474	Armadillo like helical domain containing 3.	Phosphatidylinositol 4-kinase, catalytic, beta.	0.650
ENSNMLP00000020390	ENSNMLP00000016609	Biogenesis of lysosomal organelles complex-1, subunit 2.	WAS/WASL interacting protein family member 3.	0.485
ENSNMLP00000020390	ENSNMLP00000017163	Biogenesis of lysosomal organelles complex-1, subunit 2.	Armadillo like helical domain containing 3.	0.483
ENSNMLP00000022888	ENSNMLP00000017163	ATPase H+ transporting V1 subunit C1b.	Armadillo like helical domain containing 3.	0.483
ENSNMLP00000026670	ENSNMLP00000017163	ATPase H+ transporting V1 subunit C1a.	Armadillo like helical domain containing 3.	0.483
ENSNMLP00000038474	ENSNMLP00000017163	Phosphatidylinositol 4-kinase, catalytic, beta.	Armadillo like helical domain containing 3.	0.650