STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000017180LIM-domain binding 1b. (446 aa)    
Predicted Functional Partners:
ENSNMLP00000035959
LIM domain only 2 (rhombotin-like 1).
    
 0.973
ENSNMLP00000028469
T-cell acute lymphocytic leukemia 1.
    
 0.962
ENSNMLP00000012220
LIM domain only 1.
    
 0.938
ENSNMLP00000044164
LIM domain only 3.
    
 0.938
ENSNMLP00000018660
annotation not available
    
 0.919
ENSNMLP00000034605
Transcription factor 12.
    
 0.869
ENSNMLP00000039636
annotation not available
    
 0.869
ENSNMLP00000010455
LIM homeobox 9.
    
 0.864
ENSNMLP00000019007
LIM homeobox 2b.
    
 0.864
ENSNMLP00000039390
GATA binding protein 1a.
    
 0.844
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.