STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000017259Transforming growth factor, beta receptor associated protein 1. (872 aa)    
Predicted Functional Partners:
ENSNMLP00000010712
Vacuolar protein sorting 16 homolog.
   
 0.996
ENSNMLP00000043705
VPS18 core subunit of CORVET and HOPS complexes.
   
 0.993
ENSNMLP00000034672
annotation not available
   
 0.991
ENSNMLP00000042054
VPS41 subunit of HOPS complex.
   
 0.990
ENSNMLP00000043922
VPS33A core subunit of CORVET and HOPS complexes.
   
 0.986
VPS33B
VPS33B late endosome and lysosome associated.
   
 0.980
ENSNMLP00000019625
VPS39 subunit of HOPS complex.
    
 
0.954
ENSNMLP00000023934
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 
 0.878
ENSNMLP00000004535
YKT6 v-SNARE homolog (S. cerevisiae).
    
 
 0.856
ENSNMLP00000010601
Synaptobrevin-like 1.
     
 0.845
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.