STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000017382Si:rp71-17i16.5. (973 aa)    
Predicted Functional Partners:
ENSNMLP00000013259
Phosphoinositide-3-kinase, regulatory subunit 5.
   
 0.994
ENSNMLP00000011595
RAS related 2.
   
 0.965
ENSNMLP00000019359
annotation not available
   
 0.953
ENSNMLP00000006840
Phosphoinositide-3-kinase, regulatory subunit 2 (beta).
    
 0.947
ENSNMLP00000017869
annotation not available
    
 0.947
ENSNMLP00000043326
Phosphoinositide-3-kinase, regulatory subunit 1 (alpha).
    
 0.947
KRAS
KRAS proto-oncogene, GTPase.
    
 0.918
CSDE1
Cold shock domain containing E1.
    
 0.918
HRAS
HRas proto-oncogene, GTPase.
    
 0.918
ENSNMLP00000035951
Zgc:55558.
    
 0.918
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.