STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000017393Stromal cell-derived factor 2. (223 aa)    
Predicted Functional Partners:
ENSNMLP00000036726
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 0.987
ENSNMLP00000032860
DnaJ heat shock protein family (Hsp40) member B11.
  
 0.969
ENSNMLP00000004608
BCL2 associated athanogene 3.
    
 0.934
ENSNMLP00000036038
Heat shock protein 90, beta (grp94), member 1.
   
 0.932
ENSNMLP00000005473
CDC42 small effector 2.
  
 0.913
ENSNMLP00000011688
Heat shock protein 5.
  
 0.899
ENSNMLP00000026422
annotation not available
  
 0.879
ENSNMLP00000007126
DnaJ (Hsp40) homolog, subfamily C, member 9.
   
 0.854
ENSNMLP00000025299
Peptidylprolyl isomerase B (cyclophilin B).
   
 0.853
ENSNMLP00000002523
annotation not available
   
 0.832
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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