STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000017517Zinc finger protein 142. (1295 aa)    
Predicted Functional Partners:
ENSNMLP00000012382
annotation not available
    
  0.841
ENSNMLP00000034101
Mitochondrial ribosomal protein S16.
   
 0.658
ENSNMLP00000007467
annotation not available
    
  0.593
ENSNMLP00000001602
Solute carrier family 38 member 11.
    
 0.555
ENSNMLP00000012380
annotation not available
    
  0.531
ENSNMLP00000016805
BRCA1 associated RING domain 1.
    
  0.518
SPOP
Speckle type BTB/POZ protein.
   
  0.499
ENSNMLP00000043865
Speckle type BTB/POZ protein like b.
   
  0.499
YTHDC2
YTH domain containing 2.
    
 0.490
ENSNMLP00000020091
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b.
      
 0.485
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.