STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000017672NEDD4 like E3 ubiquitin protein ligase. (1200 aa)    
Predicted Functional Partners:
ENSNMLP00000001079
Ribosomal protein S27a.
    
 0.928
ENSNMLP00000025379
Si:ch211-195b13.1.
    
 0.916
ENSNMLP00000032295
Serum/glucocorticoid regulated kinase 1.
    
 0.916
ENSNMLP00000001704
Ubiquitin B.
    
 0.896
ENSNMLP00000041450
Arrestin domain containing 3a.
    
 
 0.893
ENSNMLP00000019009
TNF receptor-associated factor 6.
    
 0.884
ENSNMLP00000037773
Fibroblast growth factor receptor 2.
    
 0.882
ENSNMLP00000017006
annotation not available
    
 0.875
ENSNMLP00000043811
annotation not available
    
 0.875
ENSNMLP00000030371
Insulin-like growth factor 1b receptor.
   
 0.874
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.