STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000018202DNA topoisomerase I. (699 aa)    
Predicted Functional Partners:
ENSNMLP00000002413
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.959
ENSNMLP00000036500
Timeless circadian clock.
    
 0.959
ENSNMLP00000001561
DNA topoisomerase II alpha.
   
 
 0.953
ENSNMLP00000020285
tyrosyl-DNA phosphodiesterase 1.
    
 
 0.924
ENSNMLP00000016463
CDC45 cell division cycle 45 homolog (S. cerevisiae).
    
 0.917
ENSNMLP00000011018
Timeless interacting protein.
    
 0.912
ENSNMLP00000017197
Minichromosome maintenance complex component 4.
    
 0.908
ENSNMLP00000021589
Structure specific recognition protein 1a.
   
 0.905
ENSNMLP00000020841
WD repeat and HMG-box DNA binding protein 1.
    
 0.892
ENSNMLP00000035548
Minichromosome maintenance 10 replication initiation factor.
     
 0.881
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.