STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000018739C1q and TNF related 9. (340 aa)    
Predicted Functional Partners:
ENSNMLP00000007467
annotation not available
    
  0.750
ENSNMLP00000015285
C1q and TNF related 5.
    
  
0.681
ENSNMLP00000005428
annotation not available
  
 
 
0.537
ENSNMLP00000032984
annotation not available
  
 
 
0.527
ENSNMLP00000021513
TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
    
  0.499
ENSNMLP00000020024
Myb-like, SWIRM and MPN domains 1.
    
 0.494
ENSNMLP00000019856
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.487
ENSNMLP00000020850
SET domain bifurcated histone lysine methyltransferase 1b.
    
 0.486
ENSNMLP00000039164
SPT3 homolog, SAGA and STAGA complex component.
    
  0.480
ENSNMLP00000033281
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
  0.468
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.