STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000019107Synaptotagmin-like 4. (708 aa)    
Predicted Functional Partners:
ENSNMLP00000042735
annotation not available
     
 0.721
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.657
ENSNMLP00000029902
annotation not available
     
 0.657
CASK
Calcium/calmodulin dependent serine protein kinase.
     
 0.623
ENSNMLP00000035289
RAB27A, member RAS oncogene family.
   
 
 0.615
ENSNMLP00000026024
RAB27B, member RAS oncogene family.
   
 
 0.606
ENSNMLP00000036282
annotation not available
   
 
 0.606
ENSNMLP00000041448
General transcription factor IIA, 1-like.
    
 0.602
ENSNMLP00000003345
Amyloid beta (A4) precursor-like protein 2.
   
 
  0.585
ENSNMLP00000006708
annotation not available
   
 0.536
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.