STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000019215Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2b. (243 aa)    
Predicted Functional Partners:
ENSNMLP00000014213
RNA binding motif protein 47.
     
 0.745
ENSNMLP00000005660
Activation-induced cytidine deaminase.
     
0.599
ENSNMLP00000014567
Myosin, light chain 1, alkali; skeletal, fast.
   
    0.554
ENSNMLP00000040745
Adenosine deaminase.
   
  
 0.539
ENSNMLP00000004340
annotation not available
     
 0.502
ENSNMLP00000004840
annotation not available
     
 0.502
ENSNMLP00000007834
DND microRNA-mediated repression inhibitor 1.
     
 0.502
ENSNMLP00000009101
Heterogeneous nuclear ribonucleoprotein R.
     
 0.502
ENSNMLP00000025576
annotation not available
     
 0.502
ENSNMLP00000026208
Synaptotagmin binding, cytoplasmic RNA interacting protein, like.
     
 0.502
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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