STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000019426Presenilin 1. (437 aa)    
Predicted Functional Partners:
ENSNMLP00000007474
Presenilin enhancer, gamma-secretase subunit.
    
 0.992
NCSTN
Nicastrin.
   
 0.991
ENSNMLP00000020557
APH1B gamma secretase subunit.
   
 0.991
ENSNMLP00000035854
Notch receptor 1b.
    
 0.974
ENSNMLP00000041888
Catenin (cadherin-associated protein), beta 1.
    
 0.965
ENSNMLP00000011306
annotation not available
    
 0.939
ENSNMLP00000006637
annotation not available
    
 0.888
ENSNMLP00000008735
Notch receptor 3.
    
 0.888
ENSNMLP00000001796
Transmembrane p24 trafficking protein 10.
    
 0.869
ENSNMLP00000003816
annotation not available
     
 0.868
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.