STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000019516Spalt-like transcription factor 4. (1029 aa)    
Predicted Functional Partners:
ENSNMLP00000010494
POU domain, class 5, transcription factor 3.
   
 0.960
ENSNMLP00000037281
Retinoblastoma binding protein 4.
   
 0.899
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.899
ENSNMLP00000036844
Cereblon.
    
 
 0.816
ENSNMLP00000006663
annotation not available
    
 0.735
ENSNMLP00000006683
Chromodomain helicase DNA binding protein 5.
    
 0.735
ENSNMLP00000014943
GATA zinc finger domain containing 2Ab.
    
 0.713
ENSNMLP00000022181
GATA zinc finger domain containing 2B.
    
 0.713
ENSNMLP00000025938
annotation not available
    
 0.713
ENSNMLP00000015473
annotation not available
    
 0.709
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.