STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000019669Rho guanine nucleotide exchange factor (GEF) 1b. (742 aa)    
Predicted Functional Partners:
ENSNMLP00000020042
Guanine nucleotide binding protein (G protein) alpha 12a.
    
 0.956
ENSNMLP00000034230
Guanine nucleotide binding protein (G protein), alpha 13b.
    
 0.956
ENSNMLP00000017799
Ras homolog gene family, member Aa.
   
 0.935
ENSNMLP00000007966
annotation not available
   
 0.886
ENSNMLP00000017134
annotation not available
   
 0.886
RHOB
Ras homolog family member B.
   
 0.886
ENSNMLP00000023150
annotation not available
   
 0.886
ENSNMLP00000023007
Plexin b2b.
    
 0.873
ENSNMLP00000030186
Plexin b2a.
    
 0.873
ENSNMLP00000009361
Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6.
    
 0.865
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.