STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000019954Tudor domain containing 3. (733 aa)    
Predicted Functional Partners:
ENSNMLP00000018040
annotation not available
    
 0.999
ENSNMLP00000005581
annotation not available
    
 0.996
ENSNMLP00000035522
annotation not available
    
 0.996
ENSNMLP00000029445
DNA topoisomerase III beta.
    
 0.994
ENSNMLP00000017123
RecQ mediated genome instability 2.
    
 0.986
ENSNMLP00000044628
Replication protein A3.
    
 0.975
ENSNMLP00000019280
annotation not available
    
 0.969
ENSNMLP00000016848
UPF1 RNA helicase and ATPase.
    
 0.903
ENSNMLP00000002856
Mago homolog, exon junction complex subunit.
    
 0.900
ENSNMLP00000000458
Replication protein A1.
    
 0.899
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.