STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000020155Cone-rod homeobox. (295 aa)    
Predicted Functional Partners:
ENSNMLP00000039856
annotation not available
    
0.732
ENSNMLP00000006225
Nuclear receptor subfamily 2, group E, member 3.
   
 
 0.582
NR2E3
Nuclear receptor subfamily 2 group E member 3.
   
 
 0.582
ENSNMLP00000023407
Thyroid hormone receptor beta.
   
 
 0.560
ENSNMLP00000005082
Nuclear receptor subfamily 1, group D, member 4b.
    
 
 0.549
ENSNMLP00000002430
Neural retina leucine zipper.
    
 
 0.544
ENSNMLP00000005027
Retinoic acid receptor, gamma b.
    
 
 0.521
RARG
Retinoic acid receptor gamma.
    
 
 0.521
ENSNMLP00000001126
annotation not available
   
  
 0.490
ENSNMLP00000001847
Transportin 3.
      
 0.477
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.