STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000020260Splicing factor 3b, subunit 1. (1277 aa)    
Predicted Functional Partners:
ENSNMLP00000004356
Splicing factor 3b, subunit 4.
    
 0.999
ENSNMLP00000005930
U2 small nuclear RNA auxiliary factor 2a.
 
 
 0.999
ENSNMLP00000007267
PHD finger protein 5A.
   
 0.999
ENSNMLP00000010703
Small nuclear ribonucleoprotein polypeptide A.
   
 0.999
ENSNMLP00000013887
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
   
 0.999
ENSNMLP00000020494
Splicing factor 3b, subunit 6.
   
 0.999
ENSNMLP00000025623
DEAD (Asp-Glu-Ala-Asp) box helicase 42.
   
 0.999
ENSNMLP00000041511
Splicing factor 3b, subunit 2.
   
 0.999
ENSNMLP00000043892
Small nuclear ribonucleoprotein 200 (U5).
   
 0.999
ENSNMLP00000005926
pre-mRNA processing factor 8.
   
 0.998
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.