STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000020536Zinc finger and BTB domain containing 7B. (355 aa)    
Predicted Functional Partners:
ENSNMLP00000012382
annotation not available
    
  0.841
ENSNMLP00000039558
X-ray repair complementing defective repair in Chinese hamster cells 5.
    
  0.815
ENSNMLP00000007463
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
  0.814
ENSNMLP00000037281
Retinoblastoma binding protein 4.
    
  0.792
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
  0.792
ENSNMLP00000006663
annotation not available
    
  0.778
ENSNMLP00000006683
Chromodomain helicase DNA binding protein 5.
    
  0.778
ENSNMLP00000000133
Histone deacetylase 1.
    
 0.640
ENSNMLP00000023710
annotation not available
    
 0.640
ENSNMLP00000023713
Histone deacetylase 8.
    
 0.640
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.