STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CERT1Ceramide transporter 1. (622 aa)    
Predicted Functional Partners:
CSNK1G2
Casein kinase 1 gamma 2.
    
 0.738
ENSNMLP00000022488
Casein kinase 1, gamma 1.
    
 0.738
ENSNMLP00000043317
Casein kinase 1, gamma 2b.
    
 0.738
ENSNMLP00000014601
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 0.570
ENSNMLP00000029075
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 0.570
ENSNMLP00000033093
annotation not available
    
 0.561
ENSNMLP00000015708
Motile sperm domain containing 1.
    
 0.522
ENSNMLP00000007293
Ran GTPase activating protein 1b.
    
   0.520
ENSNMLP00000013787
RAN GTPase activating protein 1a.
    
   0.520
ENSNMLP00000041675
StAR-related lipid transfer (START) domain containing 3.
      
 0.493
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.