STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000021430annotation not available (148 aa)    
Predicted Functional Partners:
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
  0.991
ENSNMLP00000022941
SPT4 homolog, DSIF elongation factor subunit.
   
 0.977
ENSNMLP00000030979
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
    
  0.972
ENSNMLP00000002413
SPT16 homolog, facilitates chromatin remodeling subunit.
    
  0.965
ENSNMLP00000007371
annotation not available
    
 0.964
ENSNMLP00000033415
annotation not available
    
 0.964
ENSNMLP00000023763
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
  0.941
ENSNMLP00000021589
Structure specific recognition protein 1a.
    
 0.940
ENSNMLP00000003020
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
  0.936
ENSNMLP00000017368
S1 RNA binding domain 1.
    
 0.929
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.