STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000021863SLX1 homolog B, structure-specific endonuclease subunit. (276 aa)    
Predicted Functional Partners:
ENSNMLP00000005581
annotation not available
    
 0.996
ENSNMLP00000035522
annotation not available
    
 0.996
ENSNMLP00000018040
annotation not available
   
 0.994
ENSNMLP00000033238
asparaginyl-tRNA synthetase 1.
   
 0.994
ENSNMLP00000037838
annotation not available
   
 0.986
ARPC4
Actin related protein 2/3 complex subunit 4.
    
 0.985
ENSNMLP00000028926
Actin related protein 2/3 complex, subunit 4.
    
 0.985
ENSNMLP00000026218
aspartyl-tRNA synthetase 1.
   
 0.964
ENSNMLP00000021333
BLM RecQ like helicase.
    
 0.941
ENSNMLP00000030556
annotation not available
    
 0.938
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.