STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000021875Collagen beta(1-O)galactosyltransferase 1. (640 aa)    
Predicted Functional Partners:
ENSNMLP00000009340
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
   
0.880
ENSNMLP00000013794
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3.
   
 0.880
ENSNMLP00000041782
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
   
0.880
ENSNMLP00000003129
Collagen beta(1-O)galactosyltransferase 2.
  
  
 
0.833
ENSNMLP00000011021
annotation not available
  
  
 
0.798
ENSNMLP00000032807
Cerebral endothelial cell adhesion molecule.
  
  
 
0.699
ENSNMLP00000039565
annotation not available
   
 0.670
ENSNMLP00000010131
annotation not available
    
 0.632
ENSNMLP00000021883
2-oxoglutarate and iron-dependent oxygenase domain containing 2.
   
 0.628
ENSNMLP00000004184
annotation not available
    
  0.553
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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