STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000021889penta-EF-hand domain containing 1. (258 aa)    
Predicted Functional Partners:
ENSNMLP00000015327
SEC31 homolog A, COPII coat complex component.
    
 0.950
ENSNMLP00000016767
SEC31 homolog B, COPII coat complex component.
    
 0.950
ENSNMLP00000035805
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.893
CUL3
Cullin 3.
    
 0.865
ENSNMLP00000030280
Cullin 3b.
    
 0.865
ENSNMLP00000016798
Programmed cell death 6 interacting protein.
    
 
 0.851
ENSNMLP00000039070
Kelch repeat and BTB (POZ) domain containing 8.
    
 0.846
ENSNMLP00000033726
annotation not available
   
 0.837
ENSNMLP00000000966
Kelch-like family member 8.
    
 0.830
ENSNMLP00000015878
Cullin 1a.
    
 0.830
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.