ENSNMLP00000021895 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000021895

CAP, adenylate cyclase-associated protein 1 (yeast). (464 aa)

Predicted Functional Partners:

ENSNMLP00000027685

0.931

ENSNMLP00000033714

0.880

ENSNMLP00000012974

0.876

ENSNMLP00000042801

0.876

ENSNMLP00000011498

0.845

ENSNMLP00000032798

0.845

ENSNMLP00000004011

0.844

ENSNMLP00000003951

0.836

ENSNMLP00000028387

0.836

ENSNMLP00000001348

0.833

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000001348	ENSNMLP00000021895	Drebrin-like b.	CAP, adenylate cyclase-associated protein 1 (yeast).	0.833
ENSNMLP00000001348	ENSNMLP00000027685	Drebrin-like b.	Twinfilin actin-binding protein 1a.	0.451
ENSNMLP00000003951	ENSNMLP00000004011	annotation not available	annotation not available	0.690
ENSNMLP00000003951	ENSNMLP00000011498	annotation not available	annotation not available	0.695
ENSNMLP00000003951	ENSNMLP00000021895	annotation not available	CAP, adenylate cyclase-associated protein 1 (yeast).	0.836
ENSNMLP00000003951	ENSNMLP00000027685	annotation not available	Twinfilin actin-binding protein 1a.	0.577
ENSNMLP00000003951	ENSNMLP00000032798	annotation not available	Cofilin 1.	0.695
ENSNMLP00000004011	ENSNMLP00000003951	annotation not available	annotation not available	0.690
ENSNMLP00000004011	ENSNMLP00000021895	annotation not available	CAP, adenylate cyclase-associated protein 1 (yeast).	0.844
ENSNMLP00000004011	ENSNMLP00000027685	annotation not available	Twinfilin actin-binding protein 1a.	0.686
ENSNMLP00000004011	ENSNMLP00000028387	annotation not available	Profilin 2.	0.690
ENSNMLP00000004011	ENSNMLP00000032798	annotation not available	Cofilin 1.	0.830
ENSNMLP00000011498	ENSNMLP00000003951	annotation not available	annotation not available	0.695
ENSNMLP00000011498	ENSNMLP00000021895	annotation not available	CAP, adenylate cyclase-associated protein 1 (yeast).	0.845
ENSNMLP00000011498	ENSNMLP00000027685	annotation not available	Twinfilin actin-binding protein 1a.	0.701
ENSNMLP00000011498	ENSNMLP00000028387	annotation not available	Profilin 2.	0.695
ENSNMLP00000012974	ENSNMLP00000021895	PH domain and leucine rich repeat protein phosphatase 2.	CAP, adenylate cyclase-associated protein 1 (yeast).	0.876
ENSNMLP00000021895	ENSNMLP00000001348	CAP, adenylate cyclase-associated protein 1 (yeast).	Drebrin-like b.	0.833
ENSNMLP00000021895	ENSNMLP00000003951	CAP, adenylate cyclase-associated protein 1 (yeast).	annotation not available	0.836
ENSNMLP00000021895	ENSNMLP00000004011	CAP, adenylate cyclase-associated protein 1 (yeast).	annotation not available	0.844