STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHST1Carbohydrate sulfotransferase 1. (384 aa)    
Predicted Functional Partners:
ENSNMLP00000028857
Carbohydrate (chondroitin 6) sulfotransferase 3b.
    
0.864
ENSNMLP00000020068
Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7.
     
0.841
ENSNMLP00000036708
Si:ch73-62b13.1.
  
  
 
0.841
ENSNMLP00000041741
Carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b.
  
  
 
0.810
ENSNMLP00000035455
Chondroitin sulfate proteoglycan 4.
     
 0.532
ENSNMLP00000043713
Si:dkey-193c22.2.
     
 0.532
ENSNMLP00000002530
Carbohydrate (chondroitin 4) sulfotransferase 12a.
      
 0.508
CHST13
Carbohydrate sulfotransferase 13.
      
 0.497
ENSNMLP00000028480
Carbohydrate (chondroitin 4) sulfotransferase 11.
      
 0.478
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.