STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000022001SID1 transmembrane family, member 2. (855 aa)    
Predicted Functional Partners:
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.914
ENSNMLP00000021589
Structure specific recognition protein 1a.
 
  
 0.911
ENSNMLP00000005160
Polymerase (RNA) II (DNA directed) polypeptide B.
   
 0.900
ENSNMLP00000001346
Info polymerase (RNA) II (DNA directed) polypeptide H.
    
 0.893
ENSNMLP00000003482
Polymerase (RNA) II (DNA directed) polypeptide L.
    
 0.893
ENSNMLP00000003945
Polymerase (RNA) II (DNA directed) polypeptide F.
    
 0.893
ENSNMLP00000004103
annotation not available
    
 0.893
ENSNMLP00000005080
Polymerase (RNA) II (DNA directed) polypeptide D.
    
 0.893
ENSNMLP00000013723
Polymerase (RNA) II (DNA directed) polypeptide J.
    
 0.893
POLR2E
RNA polymerase II subunit E.
    
 0.893
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.