STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000022022Lysosomal protein transmembrane 4 alpha. (275 aa)    
Predicted Functional Partners:
ENSNMLP00000002633
Lysosomal protein transmembrane 4 beta.
  
  
 
0.841
ENSNMLP00000022018
Matrilin 3a.
 
   
 0.622
ENSNMLP00000044005
Matrilin 3b.
 
   
 0.553
ENSNMLP00000001142
Proline rich Gla (G-carboxyglutamic acid) 2.
      
 0.536
ENSNMLP00000015588
Matrilin 1.
 
   
 0.525
MATN2
Matrilin 2.
 
   
 0.507
ENSNMLP00000006295
Matrilin 4.
 
   
 0.505
FBN1
Fibrillin 1.
     
 0.505
ENSNMLP00000004779
Si:dkey-43k4.5.
      
 0.479
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.