STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000022493Si:ch211-22d5.2. (348 aa)    
Predicted Functional Partners:
ENSNMLP00000021171
annotation not available
   
 0.793
ENSNMLP00000037063
Protein kinase, AMP-activated, gamma 1 non-catalytic subunit.
   
 0.793
ENSNMLP00000037208
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit b.
   
 0.793
ENSNMLP00000026148
annotation not available
    
 0.754
ENSNMLP00000026149
annotation not available
    
 0.754
ENSNMLP00000037219
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b.
    
 0.754
ENSNMLP00000040661
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a.
    
 0.754
ENSNMLP00000006847
Regulatory associated protein of MTOR, complex 1.
    
 0.715
ENSNMLP00000006098
annotation not available
  
 
 0.669
ENSNMLP00000000128
annotation not available
  
 
 0.654
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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