STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000022683annotation not available (923 aa)    
Predicted Functional Partners:
ENSNMLP00000005298
annotation not available
    
 0.808
ENSNMLP00000017720
DENN/MADD domain containing 4C.
    
0.808
ENSNMLP00000018948
VPS35 retromer complex component.
   
 
  0.783
ENSNMLP00000041052
Sorting nexin 8a.
     
 0.779
RAB7A
RAB7A, member RAS oncogene family.
     
 0.714
ENSNMLP00000035121
RAB7a, member RAS oncogene family.
     
 0.714
ENSNMLP00000011084
annotation not available
    
 0.649
ENSNMLP00000005530
annotation not available
     
 0.610
ENSNMLP00000024345
WD repeat domain 54.
    
 0.592
ENSNMLP00000007789
RAB41, member RAS oncogene family.
    
 
 0.574
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.