STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHORhodopsin. (353 aa)    
Predicted Functional Partners:
ENSNMLP00000014206
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.964
ENSNMLP00000022669
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.964
ENSNMLP00000000760
Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.
   
 0.954
ENSNMLP00000013119
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
 0.945
ENSNMLP00000033691
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
 0.945
ENSNMLP00000024263
G protein-coupled receptor kinase 1 a.
   
 0.931
ENSNMLP00000032549
annotation not available
   
 0.931
ENSNMLP00000005409
annotation not available
   
 0.915
ENSNMLP00000006057
S-antigen; retina and pineal gland (arrestin) a.
   
 0.915
ENSNMLP00000029755
G protein-coupled receptor kinase 7b.
   
 0.908
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.