STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000022926Caspase 6, apoptosis-related cysteine peptidase a. (330 aa)    
Predicted Functional Partners:
ENSNMLP00000034002
Apoptotic peptidase activating factor 1.
    
 0.957
ENSNMLP00000021361
Caspase 10, apoptosis-related cysteine peptidase.
   
0.953
ENSNMLP00000035221
annotation not available
   
0.953
ENSNMLP00000006159
Caspase 9, apoptosis-related cysteine peptidase.
    
0.940
ENSNMLP00000035163
Centromere protein N.
   
 0.910
ENSNMLP00000035406
annotation not available
   
0.897
ENSNMLP00000004506
annotation not available
   
 0.884
ENSNMLP00000024699
annotation not available
   
 0.883
LMNA
Lamin A/C.
   
 0.879
ENSNMLP00000002220
Lamin L3.
    
 0.877
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.