ENSNMLP00000022937 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000022937

DnaJ heat shock protein family (Hsp40) member B14. (401 aa)

Predicted Functional Partners:

ENSNMLP00000004608

0.858

ENSNMLP00000005089

0.802

ENSNMLP00000016698

0.790

ENSNMLP00000009573

0.788

ENSNMLP00000017666

0.744

ENSNMLP00000011688

0.733

CLPB

0.724

ENSNMLP00000042967

0.714

ENSNMLP00000002523

0.708

ENSNMLP00000018892

0.708

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLPB	ENSNMLP00000002523	ENSNMLP00000026303	ENSNMLP00000002523	ClpB homolog, mitochondrial AAA ATPase chaperonin.	annotation not available	0.877
CLPB	ENSNMLP00000004608	ENSNMLP00000026303	ENSNMLP00000004608	ClpB homolog, mitochondrial AAA ATPase chaperonin.	BCL2 associated athanogene 3.	0.413
CLPB	ENSNMLP00000005089	ENSNMLP00000026303	ENSNMLP00000005089	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Heat shock protein 4a.	0.935
CLPB	ENSNMLP00000009573	ENSNMLP00000026303	ENSNMLP00000009573	ClpB homolog, mitochondrial AAA ATPase chaperonin.	DnaJ heat shock protein family (Hsp40) member A2b.	0.959
CLPB	ENSNMLP00000011688	ENSNMLP00000026303	ENSNMLP00000011688	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Heat shock protein 5.	0.892
CLPB	ENSNMLP00000016698	ENSNMLP00000026303	ENSNMLP00000016698	ClpB homolog, mitochondrial AAA ATPase chaperonin.	DnaJ heat shock protein family (Hsp40) member A2a.	0.959
CLPB	ENSNMLP00000017666	ENSNMLP00000026303	ENSNMLP00000017666	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Heat shock protein 14.	0.876
CLPB	ENSNMLP00000018892	ENSNMLP00000026303	ENSNMLP00000018892	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	0.877
CLPB	ENSNMLP00000022937	ENSNMLP00000026303	ENSNMLP00000022937	ClpB homolog, mitochondrial AAA ATPase chaperonin.	DnaJ heat shock protein family (Hsp40) member B14.	0.724
CLPB	ENSNMLP00000042967	ENSNMLP00000026303	ENSNMLP00000042967	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Heat shock protein 9.	0.926
ENSNMLP00000002523	CLPB	ENSNMLP00000002523	ENSNMLP00000026303	annotation not available	ClpB homolog, mitochondrial AAA ATPase chaperonin.	0.877
ENSNMLP00000002523	ENSNMLP00000004608	ENSNMLP00000002523	ENSNMLP00000004608	annotation not available	BCL2 associated athanogene 3.	0.968
ENSNMLP00000002523	ENSNMLP00000005089	ENSNMLP00000002523	ENSNMLP00000005089	annotation not available	Heat shock protein 4a.	0.916
ENSNMLP00000002523	ENSNMLP00000009573	ENSNMLP00000002523	ENSNMLP00000009573	annotation not available	DnaJ heat shock protein family (Hsp40) member A2b.	0.919
ENSNMLP00000002523	ENSNMLP00000011688	ENSNMLP00000002523	ENSNMLP00000011688	annotation not available	Heat shock protein 5.	0.952
ENSNMLP00000002523	ENSNMLP00000016698	ENSNMLP00000002523	ENSNMLP00000016698	annotation not available	DnaJ heat shock protein family (Hsp40) member A2a.	0.919
ENSNMLP00000002523	ENSNMLP00000017666	ENSNMLP00000002523	ENSNMLP00000017666	annotation not available	Heat shock protein 14.	0.810
ENSNMLP00000002523	ENSNMLP00000018892	ENSNMLP00000002523	ENSNMLP00000018892	annotation not available	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	0.787
ENSNMLP00000002523	ENSNMLP00000022937	ENSNMLP00000002523	ENSNMLP00000022937	annotation not available	DnaJ heat shock protein family (Hsp40) member B14.	0.708
ENSNMLP00000002523	ENSNMLP00000042967	ENSNMLP00000002523	ENSNMLP00000042967	annotation not available	Heat shock protein 9.	0.827