STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000022992Calcium channel, voltage-dependent, gamma subunit 4b. (336 aa)    
Predicted Functional Partners:
ENSNMLP00000025147
annotation not available
   
 0.918
ENSNMLP00000031864
Glutamate receptor, ionotropic, AMPA 2b.
   
 0.918
ENSNMLP00000013061
annotation not available
     
 0.841
PPP2R2C
Protein phosphatase 2 regulatory subunit Bgamma.
    
  0.826
ENSNMLP00000022826
Protein phosphatase 2, regulatory subunit B, delta.
    
  0.826
ENSNMLP00000035656
Protein phosphatase 2, regulatory subunit B, gamma a.
    
  0.826
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
     
 0.821
ENSNMLP00000022993
Calcium channel, voltage-dependent, gamma subunit 1b.
 
   
 0.812
ENSNMLP00000030630
Calcium channel, voltage-dependent, gamma subunit 1a.
     
 0.812
ENSNMLP00000038041
Calcium channel, voltage-dependent, N type, alpha 1B subunit, b.
   
 
 0.810
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.