ENSNMLP00000023091 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000023091

annotation not available (618 aa)

Predicted Functional Partners:

ENSNMLP00000002648

0.464

ENSNMLP00000022695

0.464

ENSNMLP00000035600

0.464

ENSNMLP00000006656

0.434

ENSNMLP00000006663

0.434

ENSNMLP00000006683

0.434

ENSNMLP00000009105

0.408

ENSNMLP00000009538

0.403

ENSNMLP00000017263

0.401

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000002648	ENSNMLP00000006656	annotation not available	annotation not available	0.477
ENSNMLP00000002648	ENSNMLP00000006663	annotation not available	annotation not available	0.477
ENSNMLP00000002648	ENSNMLP00000006683	annotation not available	Chromodomain helicase DNA binding protein 5.	0.477
ENSNMLP00000002648	ENSNMLP00000023091	annotation not available	annotation not available	0.464
ENSNMLP00000002648	ENSNMLP00000035600	annotation not available	Ubiquitin-conjugating enzyme E2Ia.	0.837
ENSNMLP00000006656	ENSNMLP00000002648	annotation not available	annotation not available	0.477
ENSNMLP00000006656	ENSNMLP00000006663	annotation not available	annotation not available	0.933
ENSNMLP00000006656	ENSNMLP00000006683	annotation not available	Chromodomain helicase DNA binding protein 5.	0.900
ENSNMLP00000006656	ENSNMLP00000022695	annotation not available	Potassium channel tetramerization domain containing 2.	0.471
ENSNMLP00000006656	ENSNMLP00000023091	annotation not available	annotation not available	0.434
ENSNMLP00000006656	ENSNMLP00000035600	annotation not available	Ubiquitin-conjugating enzyme E2Ia.	0.477
ENSNMLP00000006663	ENSNMLP00000002648	annotation not available	annotation not available	0.477
ENSNMLP00000006663	ENSNMLP00000006656	annotation not available	annotation not available	0.933
ENSNMLP00000006663	ENSNMLP00000006683	annotation not available	Chromodomain helicase DNA binding protein 5.	0.900
ENSNMLP00000006663	ENSNMLP00000022695	annotation not available	Potassium channel tetramerization domain containing 2.	0.471
ENSNMLP00000006663	ENSNMLP00000023091	annotation not available	annotation not available	0.434
ENSNMLP00000006663	ENSNMLP00000035600	annotation not available	Ubiquitin-conjugating enzyme E2Ia.	0.477
ENSNMLP00000006683	ENSNMLP00000002648	Chromodomain helicase DNA binding protein 5.	annotation not available	0.477
ENSNMLP00000006683	ENSNMLP00000006656	Chromodomain helicase DNA binding protein 5.	annotation not available	0.900
ENSNMLP00000006683	ENSNMLP00000006663	Chromodomain helicase DNA binding protein 5.	annotation not available	0.900