STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000023150annotation not available (188 aa)    
Predicted Functional Partners:
ENSNMLP00000042735
annotation not available
    
 0.998
ENSNMLP00000000700
Rho guanine nucleotide exchange factor (GEF) 1a.
   
 0.915
ENSNMLP00000015003
Rho-associated, coiled-coil containing protein kinase 1.
   
 0.913
ENSNMLP00000044384
Rho-associated, coiled-coil containing protein kinase 2a.
   
 0.912
ENSNMLP00000001772
Rho GTPase activating protein 35a.
    
 0.906
ENSNMLP00000029499
Rho GTPase activating protein 35b.
    
 0.906
ENSNMLP00000038088
Protein kinase N2.
    
 0.897
ENSNMLP00000015326
Rho guanine nucleotide exchange factor (GEF) 12a.
   
 0.886
ENSNMLP00000019669
Rho guanine nucleotide exchange factor (GEF) 1b.
   
 0.886
ENSNMLP00000007467
annotation not available
   
 0.883
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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