STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000023182Peptidylprolyl isomerase Fb. (193 aa)    
Predicted Functional Partners:
ENSNMLP00000030108
Solute carrier family 25 member 4.
   
 0.946
ENSNMLP00000013601
annotation not available
   
 0.941
ENSNMLP00000036920
annotation not available
   
 0.941
ENSNMLP00000002923
annotation not available
 
 
 0.928
ENSNMLP00000002912
annotation not available
 
 
 0.914
ENSNMLP00000002906
annotation not available
 
 
 0.911
ENSNMLP00000025884
RAN binding protein 1.
 
 
 0.908
ENSNMLP00000013928
Voltage-dependent anion channel 1.
   
 0.897
ENSNMLP00000012121
Voltage-dependent anion channel 3.
   
 0.884
VDAC3
Voltage dependent anion channel 3.
   
 0.884
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.