STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000023329Apoptosis inducing factor mitochondrion associated 1. (723 aa)    
Predicted Functional Partners:
ENSNMLP00000003663
Cytochrome b5 reductase 4.
  
 
 0.923
ENSNMLP00000001459
annotation not available
  
 0.913
ENSNMLP00000018663
Ferredoxin 2.
  
 0.913
ENSNMLP00000009457
Mitochondrial ribosomal protein S9.
   
 0.912
ENSNMLP00000034101
Mitochondrial ribosomal protein S16.
  
 0.911
ENSNMLP00000003781
Aconitate decarboxylase 1.
  
 0.900
ENSNMLP00000014340
Pipecolic acid oxidase.
  
 0.900
ENSNMLP00000016455
Immunoresponsive gene 1, like.
  
 0.900
ENSNMLP00000020255
Zgc:172341.
  
 0.900
ENSNMLP00000042255
D-amino-acid oxidase, tandem duplicate 2.
  
 0.900
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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