Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ENSNMLP00000001459 | ENSNMLP00000003663 | annotation not available | Cytochrome b5 reductase 4. | 0.894 |
ENSNMLP00000001459 | ENSNMLP00000023329 | annotation not available | Apoptosis inducing factor mitochondrion associated 1. | 0.913 |
ENSNMLP00000001459 | ENSNMLP00000034101 | annotation not available | Mitochondrial ribosomal protein S16. | 0.495 |
ENSNMLP00000003663 | ENSNMLP00000001459 | Cytochrome b5 reductase 4. | annotation not available | 0.894 |
ENSNMLP00000003663 | ENSNMLP00000018663 | Cytochrome b5 reductase 4. | Ferredoxin 2. | 0.894 |
ENSNMLP00000003663 | ENSNMLP00000023329 | Cytochrome b5 reductase 4. | Apoptosis inducing factor mitochondrion associated 1. | 0.923 |
ENSNMLP00000003781 | ENSNMLP00000016455 | Aconitate decarboxylase 1. | Immunoresponsive gene 1, like. | 0.841 |
ENSNMLP00000003781 | ENSNMLP00000020255 | Aconitate decarboxylase 1. | Zgc:172341. | 0.651 |
ENSNMLP00000003781 | ENSNMLP00000023329 | Aconitate decarboxylase 1. | Apoptosis inducing factor mitochondrion associated 1. | 0.900 |
ENSNMLP00000003781 | ENSNMLP00000042255 | Aconitate decarboxylase 1. | D-amino-acid oxidase, tandem duplicate 2. | 0.651 |
ENSNMLP00000009457 | ENSNMLP00000023329 | Mitochondrial ribosomal protein S9. | Apoptosis inducing factor mitochondrion associated 1. | 0.912 |
ENSNMLP00000009457 | ENSNMLP00000034101 | Mitochondrial ribosomal protein S9. | Mitochondrial ribosomal protein S16. | 0.999 |
ENSNMLP00000014340 | ENSNMLP00000020255 | Pipecolic acid oxidase. | Zgc:172341. | 0.893 |
ENSNMLP00000014340 | ENSNMLP00000023329 | Pipecolic acid oxidase. | Apoptosis inducing factor mitochondrion associated 1. | 0.900 |
ENSNMLP00000014340 | ENSNMLP00000042255 | Pipecolic acid oxidase. | D-amino-acid oxidase, tandem duplicate 2. | 0.875 |
ENSNMLP00000016455 | ENSNMLP00000003781 | Immunoresponsive gene 1, like. | Aconitate decarboxylase 1. | 0.841 |
ENSNMLP00000016455 | ENSNMLP00000020255 | Immunoresponsive gene 1, like. | Zgc:172341. | 0.651 |
ENSNMLP00000016455 | ENSNMLP00000023329 | Immunoresponsive gene 1, like. | Apoptosis inducing factor mitochondrion associated 1. | 0.900 |
ENSNMLP00000016455 | ENSNMLP00000042255 | Immunoresponsive gene 1, like. | D-amino-acid oxidase, tandem duplicate 2. | 0.651 |
ENSNMLP00000018663 | ENSNMLP00000003663 | Ferredoxin 2. | Cytochrome b5 reductase 4. | 0.894 |
page 1 of 3