ENSNMLP00000023587 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000023587

protein-L-isoaspartate (D-aspartate) O-methyltransferase. (290 aa)

Predicted Functional Partners:

ENSNMLP00000001889

0.551

ENSNMLP00000025860

0.523

ENSNMLP00000019132

0.511

ENSNMLP00000023625

0.506

ENSNMLP00000015864

0.502

ENSNMLP00000029597

0.499

ENSNMLP00000005286

0.493

ENSNMLP00000039880

0.493

ENSNMLP00000031234

0.483

ENSNMLP00000039187

0.483

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000001889	ENSNMLP00000023587	Testis enhanced gene transcript (BAX inhibitor 1).	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	0.551
ENSNMLP00000005286	ENSNMLP00000023587	Tetratricopeptide repeat domain 7B.	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	0.493
ENSNMLP00000015864	ENSNMLP00000023587	BLOC-1 related complex subunit 5.	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	0.502
ENSNMLP00000019132	ENSNMLP00000023587	tRNA-yW synthesizing protein 1 homolog (S. cerevisiae).	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	0.511
ENSNMLP00000023587	ENSNMLP00000001889	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	Testis enhanced gene transcript (BAX inhibitor 1).	0.551
ENSNMLP00000023587	ENSNMLP00000005286	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	Tetratricopeptide repeat domain 7B.	0.493
ENSNMLP00000023587	ENSNMLP00000015864	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	BLOC-1 related complex subunit 5.	0.502
ENSNMLP00000023587	ENSNMLP00000019132	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	tRNA-yW synthesizing protein 1 homolog (S. cerevisiae).	0.511
ENSNMLP00000023587	ENSNMLP00000023625	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	NUS1 dehydrodolichyl diphosphate synthase subunit.	0.506
ENSNMLP00000023587	ENSNMLP00000025860	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	RAN, member RAS oncogene family.	0.523
ENSNMLP00000023587	ENSNMLP00000029597	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	Protein phosphatase 1, regulatory (inhibitor) subunit 14C.	0.499
ENSNMLP00000023587	ENSNMLP00000031234	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	Adenylate kinase 4.	0.483
ENSNMLP00000023587	ENSNMLP00000039187	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	Zinc finger CCCH-type containing 15.	0.483
ENSNMLP00000023587	ENSNMLP00000039880	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	Tetratricopeptide repeat domain 7A.	0.493
ENSNMLP00000023625	ENSNMLP00000023587	NUS1 dehydrodolichyl diphosphate synthase subunit.	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	0.506
ENSNMLP00000023625	ENSNMLP00000031234	NUS1 dehydrodolichyl diphosphate synthase subunit.	Adenylate kinase 4.	0.553
ENSNMLP00000025860	ENSNMLP00000023587	RAN, member RAS oncogene family.	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	0.523
ENSNMLP00000029597	ENSNMLP00000023587	Protein phosphatase 1, regulatory (inhibitor) subunit 14C.	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	0.499
ENSNMLP00000031234	ENSNMLP00000023587	Adenylate kinase 4.	protein-L-isoaspartate (D-aspartate) O-methyltransferase.	0.483
ENSNMLP00000031234	ENSNMLP00000023625	Adenylate kinase 4.	NUS1 dehydrodolichyl diphosphate synthase subunit.	0.553