STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000024447PDZ and LIM domain 5b. (399 aa)    
Predicted Functional Partners:
ENSNMLP00000000747
LIM domain binding 3a.
 
 
  0.949
ENSNMLP00000043819
LIM domain binding 3b.
 
   
 
0.907
ENSNMLP00000004816
G protein-coupled receptor kinase interacting ArfGAP 2a.
    
 0.809
ENSNMLP00000023331
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 0.809
ENSNMLP00000022162
annotation not available
    
  0.796
ENSNMLP00000038996
annotation not available
    
  0.796
ENSNMLP00000038998
Myosin IIIB.
    
  0.796
PTK2
Protein tyrosine kinase 2.
    
 0.792
ENSNMLP00000035185
annotation not available
    
 0.792
ENSNMLP00000038698
Protein tyrosine kinase 2ab.
    
 0.792
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.