STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000024513Sorting nexin 11. (185 aa)    
Predicted Functional Partners:
ENSNMLP00000018948
VPS35 retromer complex component.
   
 0.966
SNX15
Sorting nexin 15.
     
 0.887
ENSNMLP00000029048
VPS29 retromer complex component.
   
 0.885
ENSNMLP00000010306
VPS26, retromer complex component B.
    
 0.879
ENSNMLP00000023682
annotation not available
    
 0.879
ENSNMLP00000042413
VPS26, retromer complex component A.
    
 0.879
ENSNMLP00000007637
annotation not available
     
 0.855
ENSNMLP00000007644
annotation not available
     
 0.855
ENSNMLP00000020805
Wnt ligand secretion mediator.
    
 0.823
USP10
Ubiquitin specific peptidase 10.
    
 0.680
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.