STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000024910SEC14-like lipid binding 7. (440 aa)    
Predicted Functional Partners:
ENSNMLP00000019321
Phospholipase D1b.
   
 
 0.625
ENSNMLP00000042187
Phospholipase D1a.
   
 
 0.625
ENSNMLP00000009116
Sulfatase modifying factor 1.
    
  0.602
ENSNMLP00000010013
PTC7 protein phosphatase homolog b.
   
   0.561
PPTC7
PTC7 protein phosphatase homolog.
   
   0.561
ENSNMLP00000029594
SEC63 homolog, protein translocation regulator.
   
 
 0.494
ENSNMLP00000038474
Phosphatidylinositol 4-kinase, catalytic, beta.
    
 
 0.484
ENSNMLP00000004965
annotation not available
    
 0.452
RAB11A
RAB11A, member RAS oncogene family.
    
 0.452
ENSNMLP00000011695
RAB11B, member RAS oncogene family, b.
    
 0.452
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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