STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000025286methylcrotonoyl-CoA carboxylase 1 (alpha). (701 aa)    
Predicted Functional Partners:
ENSNMLP00000017330
Si:ch211-198n5.11.
 
 0.996
ENSNMLP00000043308
propionyl-CoA carboxylase subunit beta.
  
 0.995
ENSNMLP00000020277
Negative elongation factor complex member B.
   
 0.973
ENSNMLP00000034188
Malonyl CoA:ACP acyltransferase (mitochondrial).
 
 
 0.973
ENSNMLP00000024315
3-oxoacyl-ACP synthase, mitochondrial.
 
 
 0.969
ENSNMLP00000007714
Malate synthase-like.
  
 0.956
ENSNMLP00000028818
isovaleryl-CoA dehydrogenase.
  
 0.949
ENSNMLP00000022941
SPT4 homolog, DSIF elongation factor subunit.
    
 0.933
ENSNMLP00000037717
Dihydrolipoamide branched chain transacylase E2.
  
 0.931
ENSNMLP00000007184
Hydroxysteroid dehydrogenase like 2.
  
 
 0.912
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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