STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000025299Peptidylprolyl isomerase B (cyclophilin B). (231 aa)    
Predicted Functional Partners:
ENSNMLP00000034857
Fibrillarin.
   
 0.988
ENSNMLP00000036726
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 0.980
ENSNMLP00000021968
Transducin (beta)-like 3.
   
 0.978
ENSNMLP00000005429
PWP2 small subunit processome component.
   
 0.969
ENSNMLP00000004592
UTP15 small subunit processome component.
   
 0.968
ENSNMLP00000038290
UTP4 small subunit processome component.
   
 0.968
ENSNMLP00000018525
UTP6 small subunit processome component.
   
 0.967
ENSNMLP00000024121
WD repeat domain 46.
   
  0.963
ENSNMLP00000011688
Heat shock protein 5.
  
 0.959
ENSNMLP00000036038
Heat shock protein 90, beta (grp94), member 1.
  
 0.955
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.