STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000025337Retinaldehyde binding protein 1b. (324 aa)    
Predicted Functional Partners:
ENSNMLP00000015319
Short chain dehydrogenase/reductase family 16C, member 5a.
    
  0.557
ENSNMLP00000029194
annotation not available
    
  0.557
ENSNMLP00000032603
Retinol dehydrogenase 10a.
    
  0.557
ENSNMLP00000042027
Retinol dehydrogenase 20.
    
  0.557
ENSNMLP00000043271
Dehydrogenase/reductase (SDR family) member 3b.
    
  0.557
ENSNMLP00000013395
Adaptor related protein complex 1 subunit gamma 1.
    
 0.541
ENSNMLP00000029594
SEC63 homolog, protein translocation regulator.
   
 
 0.494
ENSNMLP00000036952
ADP ribosylation factor like GTPase 3, like 2.
   
  0.478
ENSNMLP00000007296
annotation not available
     
 0.474
ENSNMLP00000023899
annotation not available
     
 0.474
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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