STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000025341Mindbomb E3 ubiquitin protein ligase 2. (1033 aa)    
Predicted Functional Partners:
ENSNMLP00000001079
Ribosomal protein S27a.
   
 0.997
ENSNMLP00000035323
Tnfrsf1a-associated via death domain.
    
  0.975
ENSNMLP00000008623
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.950
ENSNMLP00000017650
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.950
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.950
ENSNMLP00000043095
TANK-binding kinase 1.
    
 0.950
ENSNMLP00000025912
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.944
ENSNMLP00000000414
Zinc finger, AN1-type domain 4.
   
 0.913
ENSNMLP00000037251
annotation not available
    
 0.912
ENSNMLP00000037256
annotation not available
    
 0.912
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.