STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000025363Ubiquitin-like 3a. (119 aa)    
Predicted Functional Partners:
UBL5
Ubiquitin like 5.
      
 0.566
ENSNMLP00000023439
Small ubiquitin like modifier 1.
      
 0.524
ENSNMLP00000005827
ATG12 autophagy related 12 homolog (S. cerevisiae).
      
 0.522
ENSNMLP00000030497
Caseinolytic mitochondrial matrix peptidase proteolytic subunit.
      
 0.517
ENSNMLP00000008295
Ubiquitin-fold modifier 1.
      
 0.513
ENSNMLP00000031277
ATG5 autophagy related 5 homolog (S. cerevisiae).
      
 0.512
ENSNMLP00000029587
Autophagy related 3.
      
 0.510
ENSNMLP00000036272
ATG7 autophagy related 7 homolog (S. cerevisiae).
      
 0.495
ENSNMLP00000013213
UFM1-specific ligase 1.
      
 0.493
ENSNMLP00000041679
Ubiquitin-like modifier activating enzyme 5.
      
 0.489
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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