STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000025858Cysteine-rich with EGF-like domains 2. (365 aa)    
Predicted Functional Partners:
ENSNMLP00000037632
Mesencephalic astrocyte-derived neurotrophic factor.
   
  
 0.934
ENSNMLP00000032860
DnaJ heat shock protein family (Hsp40) member B11.
   
 
 0.865
ENSNMLP00000005314
GDP-mannose pyrophosphorylase B.
   
  
 0.831
ENSNMLP00000021798
annotation not available
 
   
  0.791
ENSNMLP00000011688
Heat shock protein 5.
   
 
 0.789
ENSNMLP00000017393
Stromal cell-derived factor 2.
   
 
 0.705
ENSNMLP00000028913
Stromal cell-derived factor 2-like 1.
   
 
 0.705
ENSNMLP00000028159
Protein disulfide isomerase family A, member 6.
   
  
 0.676
ENSNMLP00000036038
Heat shock protein 90, beta (grp94), member 1.
   
  
 0.593
ENSNMLP00000017745
annotation not available
     
 0.566
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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