STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000026269Prostaglandin E synthase 3b (cytosolic). (145 aa)    
Predicted Functional Partners:
ENSNMLP00000038483
Stress-induced phosphoprotein 1.
   
 0.982
ENSNMLP00000016936
Protein phosphatase 5, catalytic subunit.
    
 0.978
ENSNMLP00000002523
annotation not available
   
 0.975
ENSNMLP00000018892
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.958
ENSNMLP00000022075
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.958
ENSNMLP00000044395
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.958
ENSNMLP00000013353
Peptidylprolyl isomerase D.
   
 0.955
ENSNMLP00000011166
Natural killer cell triggering receptor.
   
 0.953
ENSNMLP00000039026
annotation not available
   
 0.953
ENSNMLP00000007022
Telomerase reverse transcriptase.
    
 0.949
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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